Structure of PDB 1i08 Chain D

Receptor sequence
>1i08D (length=205) Species: 562 (Escherichia coli) [Search protein sequence]
SYTLPSLPYAYDALEPHFDKQTMEIHHTKAHQTYVNNANAALESLPEFAN
LPVEELITKLDQLPADKKTVLRNNAGGHANHSLFWKGLKKGTTLQGDLKA
AIERDFGSVDNFKAEFEKAAASRFGSGWAWLVLKGDKLAVVSTANQDSPL
MGEAISGASGFPIMGLDVWEHAYYLKFQNRRPDYIKEFWNVVNWDEAAAR
FAAKK
3D structure
PDB1i08 Removing a hydrogen bond in the dimer interface of Escherichia coli manganese superoxide dismutase alters structure and reactivity.
ChainD
Resolution2.2 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 1.15.1.1: superoxide dismutase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MN D H26 H81 D167 H171 H26 H81 D167 H171
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0004784 superoxide dismutase activity
GO:0016209 antioxidant activity
GO:0016491 oxidoreductase activity
GO:0030145 manganese ion binding
GO:0042803 protein homodimerization activity
GO:0046872 metal ion binding
Biological Process
GO:0006801 superoxide metabolic process
GO:0006979 response to oxidative stress
GO:0009408 response to heat
GO:0010447 response to acidic pH
GO:0019430 removal of superoxide radicals
GO:0071291 cellular response to selenium ion
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:1i08, PDBe:1i08, PDBj:1i08
PDBsum1i08
PubMed11294629
UniProtP00448|SODM_ECOLI Superoxide dismutase [Mn] (Gene Name=sodA)

[Back to BioLiP]