Structure of PDB 1g5q Chain D

Receptor sequence
>1g5qD (length=174) Species: 1282 (Staphylococcus epidermidis) [Search protein sequence]
MYGKLLICATASINVININHYIVELKQHFDEVNILFSPSSKNFINTDVLK
LFCDNLYDEIKDPLLNNINIVENHEYILVLPASANTINKIANGICDNLLT
TVCLTGYQKLFIFPNMNIRMWGNPFLQKNIDLLKNNDVKVYSPDMNKSFE
ISSGRYKNNITMPNIENVLNFVLN
3D structure
PDB1g5q Crystal structure of the peptidyl-cysteine decarboxylase EpiD complexed with a pentapeptide substrate.
ChainD
Resolution2.57 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) N67
Catalytic site (residue number reindexed from 1) N67
Enzyme Commision number 4.1.1.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide D N19 F52 N19 F52
BS02 peptide D N14 N117 S148 F149 E150 I151 S152 N159 T161 M162 N14 N117 S148 F149 E150 I151 S152 N159 T161 M162
BS03 FMN D T10 A11 S12 I13 S37 F43 S83 N85 T86 N115 M116 T10 A11 S12 I13 S37 F43 S83 N85 T86 N115 M116
Gene Ontology
Molecular Function
GO:0003824 catalytic activity
GO:0004633 phosphopantothenoylcysteine decarboxylase activity
GO:0010181 FMN binding
GO:0016829 lyase activity
Biological Process
GO:0015937 coenzyme A biosynthetic process
Cellular Component
GO:0071513 phosphopantothenoylcysteine decarboxylase complex

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Cellular Component
External links
PDB RCSB:1g5q, PDBe:1g5q, PDBj:1g5q
PDBsum1g5q
PubMed11101502
UniProtP30197|EPID_STAEP Epidermin decarboxylase (Gene Name=epiD)

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