Structure of PDB 1fka Chain D

Receptor sequence
>1fkaD (length=161) Species: 274 (Thermus thermophilus) [Search protein sequence]
RRPSDYAVRLREKQKLRRIYGISERQFRNLFEEASKKKGVTGSVFLGLLE
SRLDNVVYRLGFAVSRRQARQLVRHGHITVNGRRVDLPSYRVRPGDEIAV
AEKSRNLELIRQNLEAMKGRKVGPWLSLDVEGMKGKFLRLPDREDLALPV
NEQLVIEFYSR
3D structure
PDB1fka Structure of functionally activated small ribosomal subunit at 3.3 angstroms resolution.
ChainD
Resolution3.3 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna D Y54 K84 R115 S137 Y138 S208 Y6 K36 R67 S89 Y90 S160
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
GO:0046872 metal ion binding
Biological Process
GO:0006412 translation
GO:0042274 ribosomal small subunit biogenesis
Cellular Component
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:1fka, PDBe:1fka, PDBj:1fka
PDBsum1fka
PubMed11007480
UniProtP80373|RS4_THET8 Small ribosomal subunit protein uS4 (Gene Name=rpsD)

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