Structure of PDB 1ffp Chain D

Receptor sequence
>1ffpD (length=273) Species: 10090 (Mus musculus) [Search protein sequence]
PHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAPW
MEQEGPEYWERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMSGC
DLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQSG
AAEHYKAYLEGECVEWLHRYLKNGNATLLRTDSPKAHVTHHPRSKGEVTL
RCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTFQKWASVVVPL
GKEQNYTCRVYHEGLPEPLTLRW
3D structure
PDB1ffp Peptidic termini play a significant role in TCR recognition
ChainD
Resolution2.6 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide D Y7 E63 K66 Q70 W73 S77 N80 Y84 L95 Q97 T143 K146 W147 S150 A152 H155 Y156 Y159 E163 W167 Y171 Y6 E62 K65 Q69 W72 S76 N79 Y83 L94 Q96 T142 K145 W146 S149 A151 H154 Y155 Y158 E162 W166 Y170
External links
PDB RCSB:1ffp, PDBe:1ffp, PDBj:1ffp
PDBsum1ffp
PubMed12218131
UniProtP01899|HA11_MOUSE H-2 class I histocompatibility antigen, D-B alpha chain (Gene Name=H2-D1)

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