Structure of PDB 1bdv Chain D

Receptor sequence
>1bdvD (length=50) Species: 10754 (Lederbergvirus P22) [Search protein sequence]
MKGMSKMPQVNLRWPREVLDLVRKVAEENGRSVNSEIYQRVMESFKKEGR
3D structure
PDB1bdv Origins of DNA-binding specificity: role of protein contacts with the DNA backbone.
ChainD
Resolution2.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna D M1 G3 M4 S5 N11 S32 V33 N34 M1 G3 M4 S5 N11 S32 V33 N34 PDBbind-CN: Kd=17nM
BS02 dna D Q9 N11 Q9 N11 PDBbind-CN: Kd=17nM
Gene Ontology
Biological Process
GO:0006355 regulation of DNA-templated transcription

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Molecular Function
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Biological Process
External links
PDB RCSB:1bdv, PDBe:1bdv, PDBj:1bdv
PDBsum1bdv
PubMed9927650
UniProtP03050|RARC_BPP22 Transcriptional repressor arc (Gene Name=arc)

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