Structure of PDB 1a0e Chain D

Receptor sequence
>1a0eD (length=443) Species: 2337 (Thermotoga neapolitana) [Search protein sequence]
AEFFPEIPKVQFEGKESTNPLAFKFYDPEEIIDGKPLKDHLKFSVAFWHT
FVNEGRDPFGDPTADRPWNRYTDPMDKAFARVDALFEFCEKLNIEYFCFH
DRDIAPEGKTLRETNKILDKVVERIKERMKDSNVKLLWGTANLFSHPRYM
HGAATTCSADVFAYAAAQVKKALEITKELGGEGYVFWGGREGYETLLNTD
LGFELENLARFLRMAVDYAKRIGFTGQFLIEPKPKEPTKHQYDFDVATAY
AFLKSHGLDEYFKFNIEANHATLAGHTFQHELRMARILGKLGSIDANQGD
LLLGWDTDQFPTNVYDTTLAMYEVIKAGGFTKGGLNFDAKVRRASYKVED
LFIGHIAGMDTFALGFKVAYKLVKDGVLDKFIEEKYRSFREGIGRDIVEG
KVDFEKLEEYIIDKETIELPSGKQEYLESLINSYIVKTILELR
3D structure
PDB1a0e Xyla Cloning and Sequencing and Biochemical Characterization of Xylose Isomerase from Thermotoga Neapolitana
ChainD
Resolution2.7 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) W138 D338
Catalytic site (residue number reindexed from 1) W138 D338
Enzyme Commision number 5.3.1.5: xylose isomerase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 CO D E231 E267 D295 D338 E231 E267 D295 D338
BS02 CO D E267 H270 D308 E267 H270 D308
Gene Ontology
Molecular Function
GO:0000287 magnesium ion binding
GO:0009045 xylose isomerase activity
GO:0016853 isomerase activity
GO:0046872 metal ion binding
Biological Process
GO:0005975 carbohydrate metabolic process
GO:0042732 D-xylose metabolic process
Cellular Component
GO:0005737 cytoplasm

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Molecular Function

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Biological Process

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Cellular Component
External links
PDB RCSB:1a0e, PDBe:1a0e, PDBj:1a0e
PDBsum1a0e
PubMed
UniProtP45687|XYLA_THENE Xylose isomerase (Gene Name=xylA)

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