Structure of PDB 6hiw Chain Cp

Receptor sequence

>6hiwCp (length=175) Species: 5702 (Trypanosoma brucei brucei) [Search protein sequence]

DQTYGPHKSYKYTYMPDPRKLAPIETTQRSEIVPQSIRPPTSYVPNHETF
LERADIHRLRPTSDFKASFKDWNDLFTCDKRQLRVRGIPRMTRDAIRTAV
QAFQNGNPPERFDTKEEWLYYKQFKTVDYSYRVIPELPEKYRPHQSGIDQ
APLPDYREINKMPQWAECEERRQSK

3D structure

PDB

6hiw Evolutionary shift toward protein-based architecture in trypanosomal mitochondrial ribosomes.

Chain

Resolution

3.37 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	Cp	D10 Q11 T12 Y13 P15 H16 S18 K20 L30 R38 Q44 H66 R67 L68 K89 R90 R93 R99 M100 R106 T107 Q110 R120 T123 W127 V136 D137 Y138 S139 Y140	D1 Q2 T3 Y4 P6 H7 S9 K11 L21 R29 Q35 H57 R58 L59 K80 R81 R84 R90 M91 R97 T98 Q101 R111 T114 W118 V127 D128 Y129 S130 Y131

Gene Ontology

	Cellular Component
GO:0005739	mitochondrion
GO:0005763	mitochondrial small ribosomal subunit

View graph for
Cellular Component

External links

PDB	RCSB:6hiw, PDBe:6hiw, PDBj:6hiw
PDBsum	6hiw
PubMed	30213880
UniProt	Q389L3

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