Structure of PDB 6xu7 Chain Ch

Receptor sequence

>6xu7Ch (length=123) Species: 7227 (Drosophila melanogaster) [Search protein sequence]

MVKVKCSELRIKDKKELTKQLDELKNELLSLRVAKVTGGAPSKLSKIRVV
RKAIARVYIVMHQKQKENLRKVFKNKKYKPLDLRKKKTRAIRKALSPRDA
NRKTLKEIRKRSVFPQRKFAVKA

3D structure

PDB

6xu7 Ribosome heterogeneity in Drosophila melanogaster gonads through paralog-switching.

Chain

Resolution

4.9 Å

3D
structure

Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	Ch	M1 V2 K3 K5 C6 R10 K35 S42 K46 R51 K52 A55 Y58 I59 H62 K66 R89 R92	M1 V2 K3 K5 C6 R10 K35 S42 K46 R51 K52 A55 Y58 I59 H62 K66 R89 R92
BS02	rna	Ch	R70 K74 N75 K77 Y78 R84 K85 K93 K106 R109 K110 R111 S112 F114	R70 K74 N75 K77 Y78 R84 K85 K93 K106 R109 K110 R111 S112 F114

Gene Ontology

	Molecular Function
GO:0003729	mRNA binding
GO:0003735	structural constituent of ribosome

	Biological Process
GO:0000463	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0002181	cytoplasmic translation
GO:0006412	translation

	Cellular Component
GO:0005840	ribosome
GO:0022625	cytosolic large ribosomal subunit
GO:0022626	cytosolic ribosome
GO:1990904	ribonucleoprotein complex

External links