Structure of PDB 4v6x Chain Ch

Receptor sequence
>4v6xCh (length=123) Species: 9606 (Homo sapiens) [Search protein sequence]
MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVV
RKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEE
NLKTKKQQRKERLYPLRKYAVKA
3D structure
PDB4v6x Structures of the human and Drosophila 80S ribosome.
ChainCh
Resolution5.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna Ch G75 Y78 R89 R93 H98 K106 K110 R112 Y114 G75 Y78 R89 R93 H98 K106 K110 R112 Y114
BS02 rna Ch K5 A6 R7 K35 R48 K52 A55 R56 L58 T59 N62 K66 R70 L81 R84 T88 R89 R92 K5 A6 R7 K35 R48 K52 A55 R56 L58 T59 N62 K66 R70 L81 R84 T88 R89 R92
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003729 mRNA binding
GO:0003735 structural constituent of ribosome
Biological Process
GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005730 nucleolus
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0016020 membrane
GO:0022625 cytosolic large ribosomal subunit
GO:0022626 cytosolic ribosome
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:4v6x, PDBe:4v6x, PDBj:4v6x
PDBsum4v6x
PubMed23636399
UniProtP42766|RL35_HUMAN Large ribosomal subunit protein uL29 (Gene Name=RPL35)

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