Structure of PDB 8i9t Chain Ce

Receptor sequence
>8i9tCe (length=194) Species: 759272 (Thermochaetoides thermophila DSM 1495) [Search protein sequence]
SDEIVWQIINQQFCAFKLKTTKGQNFCRNEYSVSGLCNRQSCPLANSRYA
TVRQSPKGTIYLYIKTIERSHMPSKWWEKIKLSQNYQKALEQIDQRLQFF
PKFLIHKCKQRLTRLVQVAIRMRRIAAEEARLGEKLVPKMAPKIKKREEA
RERKALAAAKLERTIERELLDRLRQGAYGDQPLNCNPQIWKKVL
3D structure
PDB8i9t Mechanism of 5S RNP recruitment and helicase-surveilled rRNA maturation during pre-60S biogenesis.
ChainCe
Resolution3.6 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna Ce W7 N11 Q12 Q13 F14 A16 K20 N26 R29 C38 N39 Q41 K58 Y62 K76 W78 K80 I81 K82 L83 S84 Q85 Q93 K103 H107 R125 P143 K144 K147 W6 N10 Q11 Q12 F13 A15 K19 N25 R28 C37 N38 Q40 K57 Y61 K75 W77 K79 I80 K81 L82 S83 Q84 Q92 K102 H106 R124 P142 K143 K146
Gene Ontology
Biological Process
GO:0000460 maturation of 5.8S rRNA
GO:0000470 maturation of LSU-rRNA
Cellular Component
GO:0005634 nucleus
GO:0005730 nucleolus
GO:0030687 preribosome, large subunit precursor

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Biological Process
View graph for
Cellular Component
External links
PDB RCSB:8i9t, PDBe:8i9t, PDBj:8i9t
PDBsum8i9t
PubMed37129998
UniProtG0SFD6

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