Structure of PDB 6sga Chain Ca

Receptor sequence
>6sgaCa (length=512) Species: 5702 (Trypanosoma brucei brucei) [Search protein sequence]
SFDAPQWDLWQSRPRSEDMDEALQPFMDMPKSLKDRRYDIPWWANPFGAW
YLQNILSLELLKLKSKTNAEKIATYRSYMRSLASGKDNTMSDDDVIRNII
KERWKTLEFGDRNAGYPCTFGDYIQFLNEWFKSLDEEGMQRLREHFDRRI
RPLLAVMSPVDILWLEALTQNSPHNKEQLQRKIAFQTSLGTPEFFDMSKR
LRYEINEDYKVRDELGPELFALWSKAPERWPPERLSKMYGLDFTLVRKIL
VWHHFKACYDACVEPDWSLPKRLFALEWIRDVRARKHGLFYGKMRFAEQK
ITFYSDRFLFRDLVNRREASYANVWEMDDPYRFLQTEQDYEDYWGDNYDV
YRRMFPEMIGRTGEPVQQYGQMPIWAGPHRQHANKSEHNWMFAEIGVNVG
HEALKKLELDPTNEKRRRFVIRQPDGTLRSAKMSEMRAWYWKEEWADFRF
WAPQMEWGIENTPSQEQYQEHVPDTTDADFRKQRRIQSRPVKWFYESHYE
REVRWPDVINAA
3D structure
PDB6sga Mitoribosomal small subunit biogenesis in trypanosomes involves an extensive assembly machinery.
ChainCa
Resolution3.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide Ca Q76 I214 Q24 I162
BS02 rna Ca F348 K352 I353 T354 F355 R369 R432 F296 K300 I301 T302 F303 R317 R380
Gene Ontology
Cellular Component
GO:0005739 mitochondrion
GO:0005763 mitochondrial small ribosomal subunit

View graph for
Cellular Component
External links
PDB RCSB:6sga, PDBe:6sga, PDBj:6sga
PDBsum6sga
PubMed31515389
UniProtQ38DR3

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