Structure of PDB 9bh5 Chain CY

Receptor sequence

>9bh5CY (length=132) Species: 6239 (Caenorhabditis elegans) [Search protein sequence]

MKVNPFVSSDSGKSRKAHFNAPSHERRRIMSAPLTKELRTKHGIRAIPIR
TDDEVVVMRGRHKGNTGRVLRCYRKKFVIHIDKITREKANGSTVHIGIHP
SKVAITKLKLDKDRRALVERKAAGRSRVTGIL

3D structure

PDB

9bh5 High-Resolution Reconstruction of a C. elegans Ribosome Sheds Light on Evolutionary Dynamics and Tissue Specificity.

Chain

Resolution

2.63 Å

3D
structure

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	CY	G12 R15 K16 F19 P22 S23 H24 R27 R50 T51 R71 C72 Y73 R74 D113 R120	G12 R15 K16 F19 P22 S23 H24 R27 R50 T51 R71 C72 Y73 R74 D113 R120
BS02	rna	CY	M1 K2 V3 N4 F6 S8 S9 S11 K13 S14 R15 H18 R28 S31 P33 R39 R45 R59 G60 R61 R86 K88 A89 S101 K102 R120 K121 R125 R127 V128 L132	M1 K2 V3 N4 F6 S8 S9 S11 K13 S14 R15 H18 R28 S31 P33 R39 R45 R59 G60 R61 R86 K88 A89 S101 K102 R120 K121 R125 R127 V128 L132

External links

PDB	RCSB:9bh5, PDBe:9bh5, PDBj:9bh5
PDBsum	9bh5
PubMed	39209556
UniProt	Q19869\|RL26_CAEEL Large ribosomal subunit protein uL24 (Gene Name=rpl-26)