Structure of PDB 8i9x Chain CY

Receptor sequence
>8i9xCY (length=410) Species: 759272 (Thermochaetoides thermophila DSM 1495) [Search protein sequence]
GTAKKNLKATKKFEKKHLKGVLERRNKVKNKAAEMSVDDFFKGGFEILSS
FRKLLKMLIKTVVAFWSQTDSTRITAFLVIRRLVVIGKAVRETVLKASYQ
GLVQGCRVTNANTLSGINLMKNSAAELWGLDQNLGYTTAFTSIRQLAIHL
RNSIINNKNQAYRNVYNWQYVHSLDFWSCVLSEHCSSPLRPLIYPLVQVT
LGAMRLIPTAIYFPLRFHLIRSLLRLSRATDTYIPLASALLEVLQSAEMK
KPPKSSTLKPLDFATAYKTPKSYLRTRVYQDGVGEQVVELLSEFFVLWSR
NIAFPEFALPTIVALKRWMKEMRKGNKNAKLGSSLVVLVQKLEMNAKFIE
ERRAKVDFAPKDRAQVDAFLKDLEWEKTPLGAYVVAQRKLREERKRLMEE
ARREEERKRR
3D structure
PDB8i9x Mechanism of 5S RNP recruitment and helicase-surveilled rRNA maturation during pre-60S biogenesis.
ChainCY
Resolution2.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna CY G2 A4 K5 K6 N7 L8 K9 A10 T11 K12 K13 F14 E15 K16 L19 L23 R25 R26 N27 K30 G1 A3 K4 K5 N6 L7 K8 A9 T10 K11 K12 F13 E14 K15 L18 L22 R24 R25 N26 K29
Gene Ontology
Biological Process
GO:0042273 ribosomal large subunit biogenesis
Cellular Component
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005730 nucleolus
GO:0030690 Noc1p-Noc2p complex
GO:0030691 Noc2p-Noc3p complex

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Biological Process
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Cellular Component
External links
PDB RCSB:8i9x, PDBe:8i9x, PDBj:8i9x
PDBsum8i9x
PubMed37129998
UniProtG0SD05

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