Structure of PDB 8rdw Chain CT

Receptor sequence
>8rdwCT (length=205) Species: 45610 (Psychrobacter urativorans) [Search protein sequence]
GQKVHPIGIRLGVVKKHNANWYASPKQYSEYLINDIQVREYLRKKLDSAM
ISNIMIERPTGAAKITIATARPGIVIGKKGEDIERLQKELTKMMGVPAQV
NIEEITSPDLDARLVADGIGSQLERRVMFRRAMKRAVQNSMRSGAKGIKV
ELSGRLGGAEIARTEWYREGRVPLHTLRADIDYASVRAETTYGTIGVKVW
IFRGE
3D structure
PDB8rdw A new family of bacterial ribosome hibernation factors
ChainCT
Resolution2.74 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 rna CT G2 Q3 K4 V5 I10 S154 R156 E161 I162 A163 W167 R169 G171 R172 P174 L175 H176 T177 L178 R179 R188 Y193 G194 T195 G197 K199 G1 Q2 K3 V4 I9 S153 R155 E160 I161 A162 W166 R168 G170 R171 P173 L174 H175 T176 L177 R178 R187 Y192 G193 T194 G196 K198
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
GO:0003729 mRNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:8rdw, PDBe:8rdw, PDBj:8rdw
PDBsum8rdw
PubMed38355796
UniProtA0A0M4T6V9

[Back to BioLiP]