Structure of PDB 6sga Chain CP

Receptor sequence
>6sgaCP (length=180) Species: 5702 (Trypanosoma brucei brucei) [Search protein sequence]
ARAVIKRRSPQLWGAPGAPIIRMRGHHVVWKFQSYDLVVEHTHKRRNSDI
RLLHYLGKHCPHPQKSLWSPDTPVAQDRHLFMLTTVDIDAFKYWFGVKRC
RLSMKPWALLAKAGLLPPSLTQNSKIMPKPLFDKESLMRYYLANRKDEDV
MAREKYLNYENSMVKTEEERAAERPVAPYL
3D structure
PDB6sga Mitoribosomal small subunit biogenesis in trypanosomes involves an extensive assembly machinery.
ChainCP
Resolution3.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna CP A9 R10 A11 V12 I13 K14 R15 R16 P18 Q19 L20 W21 G22 A23 P24 G25 A26 R30 W38 H51 K52 R54 N55 D57 R59 R107 L128 N131 K133 K137 A1 R2 A3 V4 I5 K6 R7 R8 P10 Q11 L12 W13 G14 A15 P16 G17 A18 R22 W30 H43 K44 R46 N47 D49 R51 R99 L120 N123 K125 K129
Gene Ontology
Cellular Component
GO:0005737 cytoplasm
GO:0005739 mitochondrion
GO:0005763 mitochondrial small ribosomal subunit

View graph for
Cellular Component
External links
PDB RCSB:6sga, PDBe:6sga, PDBj:6sga
PDBsum6sga
PubMed31515389
UniProtQ384N9

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