Structure of PDB 8pvl Chain CN

Receptor sequence
>8pvlCN (length=246) Species: 759272 (Thermochaetoides thermophila DSM 1495) [Search protein sequence]
MAVRAQFENSNEVGVFATLTNSYCLVALGASENFYSVFEAELQDVIPICR
TTIAGTRIIGRLTAGNRKGLLVPTTTTDQELQHLRNSLPDDIRIQRIEER
LSALGNVIVCNDHTALIHPDLERETEEIIADVLGVEVFRQTIADHVLVGS
YMALSNQGGLVHPKTSIQDQDELSSLLGVPLVAGSVNRGSNVIGGGMVVN
DWLAVTGLDTTAPELSVIESVFRLGEGAGPGAINTSMKNTIVESFY
3D structure
PDB8pvl Structural insights into coordinating 5S RNP rotation with ITS2 pre-RNA processing during ribosome formation.
ChainCN
Resolution2.19 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna CN N9 R188 N9 R188
Gene Ontology
Molecular Function
GO:0003743 translation initiation factor activity
GO:0043022 ribosome binding
GO:0043023 ribosomal large subunit binding
Biological Process
GO:0000054 ribosomal subunit export from nucleus
GO:0000460 maturation of 5.8S rRNA
GO:0000470 maturation of LSU-rRNA
GO:0006412 translation
GO:0006413 translational initiation
GO:0042254 ribosome biogenesis
GO:0042256 cytosolic ribosome assembly
GO:0042273 ribosomal large subunit biogenesis
GO:1902626 assembly of large subunit precursor of preribosome
Cellular Component
GO:0005634 nucleus
GO:0005730 nucleolus
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0030687 preribosome, large subunit precursor

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Molecular Function
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Cellular Component
External links
PDB RCSB:8pvl, PDBe:8pvl, PDBj:8pvl
PDBsum8pvl
PubMed37921038
UniProtG0S683

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