Structure of PDB 8i9y Chain CM

Receptor sequence
>8i9yCM (length=223) Species: 759272 (Thermochaetoides thermophila DSM 1495) [Search protein sequence]
ILVPETLLKKRKSQEKARAERAAALEKRKQANKEKRQVIFKRAEKYVKEY
REQEREKIRLARIAKQQGSFHIPAEAKLVFVIRIKGINKIPPKPRKILQL
LRLRQINNGVFVKVTKATAEMIKIVEPWVAYGYPNLKSVRELIYKRGYGK
VNGQRIPLTDNAIIEENLGKYGIICIEDLIHEIFTVGPNFKQAANFLWPF
KLSNPNGGGNREEHINALIRAMN
3D structure
PDB8i9y Mechanism of 5S RNP recruitment and helicase-surveilled rRNA maturation during pre-60S biogenesis.
ChainCM
Resolution3.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna CM K21 Q25 E26 R29 K10 Q14 E15 R18
BS02 rna CM F51 R53 E55 K56 R66 R73 K76 F40 R42 E44 K45 R55 R62 K65
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
Biological Process
GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8i9y, PDBe:8i9y, PDBj:8i9y
PDBsum8i9y
PubMed37129998
UniProtG0SFL0

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