Structure of PDB 4v52 Chain CM

Receptor sequence
>4v52CM (length=113) Species: 562 (Escherichia coli) [Search protein sequence]
ARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEG
QIDTLRDEVAKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQR
TKTNARTRKGPRK
3D structure
PDB4v52 Structural basis for aminoglycoside inhibition of bacterial ribosome recycling.
ChainCM
Resolution3.21 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna CM K12 H13 I16 G23 V24 G25 T27 R28 S75 Y85 R86 H90 L94 P95 R97 Q99 R100 T101 K102 N104 A105 R106 T107 K109 R112 K113 K12 H13 I16 G23 V24 G25 T27 R28 S75 Y85 R86 H90 L94 P95 R97 Q99 R100 T101 K102 N104 A105 R106 T107 K109 R112 K113
Gene Ontology
Molecular Function
GO:0000049 tRNA binding
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
GO:0019843 rRNA binding
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:4v52, PDBe:4v52, PDBj:4v52
PDBsum4v52
PubMed17660832
UniProtP0A7S9|RS13_ECOLI Small ribosomal subunit protein uS13 (Gene Name=rpsM)

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