Structure of PDB 4wqy Chain CL

Receptor sequence
>4wqyCL (length=139) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence]
KKVVAVVKLQLPAGKATPAPPVGPALGQHGANIMEFVKAFNAATANMGDA
IVPVEITIYADRSFTFVTKTPPASYLIRKAAGLEKGAHKPGREKVGRITW
EQVLEIAKQKMPDLNTTDLEAAARMIAGSARSMGVEVVG
3D structure
PDB4wqy Conformational Changes of Elongation Factor G on the Ribosome during tRNA Translocation.
ChainCL
Resolution2.8 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna CL Q11 P22 I52 P73 A74 S75 K86 G87 H89 P91 K111 D114 L115 N116 T117 A122 R125 M126 G129 S130 R132 S133 M134 Q10 P21 I51 P72 A73 S74 K85 G86 H88 P90 K110 D113 L114 N115 T116 A121 R124 M125 G128 S129 R131 S132 M133
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
GO:0070180 large ribosomal subunit rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0015934 large ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:4wqy, PDBe:4wqy, PDBj:4wqy
PDBsum4wqy
PubMed25594181
UniProtQ5SLP6|RL11_THET8 Large ribosomal subunit protein uL11 (Gene Name=rplK)

[Back to BioLiP]