Structure of PDB 8i9y Chain CF

Receptor sequence
>8i9yCF (length=245) Species: 759272 (Thermochaetoides thermophila DSM 1495) [Search protein sequence]
PKSKRARVYHLIQVNKKGREAKERLFSNIRETIPKYQHCFVFSVDNMRNN
YLKDVRHELNDCRIFFGKTKLMARALGTTPEEEQADGLHRLTRYLTGTVG
LLFTNRDPADIESYFSNLSQVDFARAGTVAPRTVTVPTGIVYSTGGEVPP
EHDVPVSHTLEPELRRLGMPVRMIKGKVCLGDEKGEASEGYTICKEGEVL
DSRQTRLLKLFSICLSEFKVSLLGYWNSASGEVTELEAGKTRPKR
3D structure
PDB8i9y Mechanism of 5S RNP recruitment and helicase-surveilled rRNA maturation during pre-60S biogenesis.
ChainCF
Resolution3.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna CF K3 S4 K5 R6 R8 H11 L12 I13 V15 K17 K18 R20 R25 R49 K54 R57 R64 F66 F67 K69 T70 K71 R75 T99 R126 T160 S203 T206 R207 K210 K2 S3 K4 R5 R7 H10 L11 I12 V14 K16 K17 R19 R24 R48 K53 R56 R63 F65 F66 K68 T69 K70 R74 T98 R125 T159 S202 T205 R206 K209
Gene Ontology
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0000956 nuclear-transcribed mRNA catabolic process
GO:0006364 rRNA processing
GO:0042273 ribosomal large subunit biogenesis
Cellular Component
GO:0005634 nucleus
GO:0005730 nucleolus
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0030687 preribosome, large subunit precursor
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8i9y, PDBe:8i9y, PDBj:8i9y
PDBsum8i9y
PubMed37129998
UniProtG0S616|MRT4_CHATD Large ribosomal subunit protein uL10 (Gene Name=CTHT_0025680)

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