Structure of PDB 9cai Chain CE

Receptor sequence
>9caiCE (length=139) Species: 6239 (Caenorhabditis elegans) [Search protein sequence]
KTVTLRKTLTPGTVLIVLAGRHKGKRVVFLKQLPQSGLLLVTGPHKINGF
PLRRIGQAFVIATSLKVNVSGVKIPEHINDEYFKRKEYTVSEQRKKDIKT
VDAPILAAIKKHPEHKFLFGYLGTRFSLGKNQYPHKMQF
3D structure
PDB9cai High-Resolution Reconstruction of a C. elegans Ribosome Sheds Light on Evolutionary Dynamics and Tissue Specificity.
ChainCE
Resolution2.59 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna CE G82 R83 H84 K85 L100 H107 K108 I109 G111 P113 R115 R116 F121 R147 Y166 V168 K173 K188 K194 F197 K208 G20 R21 H22 K23 L38 H45 K46 I47 G49 P51 R53 R54 F59 R85 Y88 V90 K95 K110 K116 F119 K130
External links
PDB RCSB:9cai, PDBe:9cai, PDBj:9cai
PDBsum9cai
PubMed39209556
UniProtP47991|RL6_CAEEL Large ribosomal subunit protein eL6 (Gene Name=rpl-6)

[Back to BioLiP]