Structure of PDB 6rxt Chain CC

Receptor sequence
>6rxtCC (length=387) Species: 209285 (Thermochaetoides thermophila) [Search protein sequence]
VVNFLLFESAVGFSLFEVVHQADTVGLELPEVKDAMKTLDKFGKMVKLRS
FNPWTSAAQGLEAINLISEGIMPEYLKSALEMNLPQTSGKKSKVVLGVAD
KKLAGEITAAFPGVQCEAADTSEVVAALLRGIRTHANKLHKSLQEGDIGR
AQLGLGHAYSRAKVKFSVHKNDNHIIQGIATLDALDKSINQGAMRVREWY
GWHFPELIRIVSDNITYAKVVLAIGNKSSLTDESVDDLANVLNQDQDKAL
AIIQAAKVSMGQDISEVDLQMVRDLASNVTSMADYRRILAESLDKKMSEV
APNLQVILGTPVAARLIAHAGSLTNLAKYPASTLQILPKVKGRISRYLAN
KCSIASRIDNFSEKPTRHFGEVLRQQLEQRLEWYAKG
3D structure
PDB6rxt Thermophile 90S Pre-ribosome Structures Reveal the Reverse Order of Co-transcriptional 18S rRNA Subdomain Integration.
ChainCC
Resolution7.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna CC H22 L41 K46 Q88 S90 K92 K93 S94 K140 L141 K143 H20 L39 K44 Q86 S88 K90 K91 S92 K138 L139 K141
BS02 rna CC K43 M196 I338 R377 R380 K385 K41 M194 I336 R343 R346 K351
Gene Ontology
Cellular Component
GO:0031428 box C/D methylation guide snoRNP complex
GO:0032040 small-subunit processome

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Molecular Function
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Cellular Component
External links
PDB RCSB:6rxt, PDBe:6rxt, PDBj:6rxt
PDBsum6rxt
PubMed31378463
UniProtG0S2U4

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