Structure of PDB 5ndv Chain C7

Receptor sequence
>5ndvC7 (length=115) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence]
GRVRTKTVKRASKALIERYYPKLTLDFQTNKRLCDEIATIQSKRLRNKIA
GYTTHLMKRIQKGPVRGISFKLQEEERERKDQYVPEVSRSNGVLNVDNQT
SDLVKSLGLKLPLSV
3D structure
PDB5ndv Aminoglycoside interactions and impacts on the eukaryotic ribosome.
ChainC7
Resolution3.3 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna C7 G2 R3 V4 R5 K7 K10 R11 F28 K32 R33 S43 K44 R45 L46 N48 K49 G52 K59 R60 G1 R2 V3 R4 K6 K9 R10 F27 K31 R32 S42 K43 R44 L45 N47 K48 G51 K58 R59
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0000028 ribosomal small subunit assembly
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:5ndv, PDBe:5ndv, PDBj:5ndv
PDBsum5ndv
PubMed29208708
UniProtP02407|RS17A_YEAST Small ribosomal subunit protein eS17A (Gene Name=RPS17A)

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