Structure of PDB 4wpo Chain C3

Receptor sequence
>4wpoC3 (length=59) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence]
PRLKVKLVKSPIGYPKDQKAALKALGLRRLQQERVLEDTPAIRGNVEKVA
HLVRVEVVE
3D structure
PDB4wpo Conformational Changes of Elongation Factor G on the Ribosome during tRNA Translocation.
ChainC3
Resolution2.8 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna C3 S11 I13 G14 Y15 P16 K17 A21 A22 K24 R29 R30 L31 Q32 P41 A42 G45 N46 K49 S10 I12 G13 Y14 P15 K16 A20 A21 K23 R28 R29 L30 Q31 P40 A41 G44 N45 K48
BS02 rna C3 Y15 Q19 H52 Y14 Q18 H51
BS03 MG C3 K10 S11 K9 S10
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0015934 large ribosomal subunit
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:4wpo, PDBe:4wpo, PDBj:4wpo
PDBsum4wpo
PubMed25594181
UniProtQ5SHQ6|RL30_THET8 Large ribosomal subunit protein uL30 (Gene Name=rpmD)

[Back to BioLiP]