Structure of PDB 4v5b Chain C3

Receptor sequence
>4v5bC3 (length=64) Species: 562 (Escherichia coli) [Search protein sequence]
PKIKTVRGAAKRFKKTGKGGFKHKHANLRHILTKKATKRKRHLRPKAMVS
KGDLGLVIACLPYA
3D structure
PDB4v5b A Peptide Deformylase-Ribosome Complex Reveals Mechanism of Nascent Chain Processing.
ChainC3
Resolution3.74 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna C3 P1 K2 I3 K4 V6 R7 R12 T16 K18 K22 H25 A26 N27 R29 H30 I31 L32 K34 K35 T37 K38 R39 K40 R41 R44 K46 V49 K51 C60 L61 P1 K2 I3 K4 V6 R7 R12 T16 K18 K22 H25 A26 N27 R29 H30 I31 L32 K34 K35 T37 K38 R39 K40 R41 R44 K46 V49 K51 C60 L61
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:4v5b, PDBe:4v5b, PDBj:4v5b
PDBsum4v5b
PubMed18288106
UniProtP0A7Q1|RL35_ECOLI Large ribosomal subunit protein bL35 (Gene Name=rpmI)

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