Structure of PDB 9c3u Chain C

Receptor sequence

>9c3uC (length=238) Species: 95486 (Burkholderia cenocepacia) [Search protein sequence]

SGIELHNRDFLTDAAHLPDASIDLIVADPPYGLNDSDKRSGDDFLAWTRE
WLELAIPLKPSGSMYIFCTWQYAPEIFSKTQLTMVNEIIWDRRVPSMGGT
TRRFTSVHDNIGFFAVSRAYYFDLDPVRIPYDADTKKARSRKLFEGSKWL
EMGYNPKDVWSVSRLHRQHAERVDHPTQKPLEIIERMVLASCPPGGRVLD
PFMGSGTTAACARQGRDFVGYEINESYCAIAHERVNAL

3D structure

PDB

9c3u Burkholderia cenocepacia epigenetic regulator M.BceJIV simultaneously engages two DNA recognition sequences for methylation.

Chain

Resolution

2.77 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	dna	C	P60 P61 Y62 D73 T106 Q108 S135 M136 G137 G138 T139 R142 S145 R203 H205 Q207 T216 K218	P29 P30 Y31 D37 T69 Q71 S96 M97 G98 G99 T100 R103 S106 R164 H166 Q168 T177 K179
BS02	dna	C	V133 M136 G137 G138 S202 H205 Q207 H208	V94 M97 G98 G99 S163 H166 Q168 H169
BS03	dna	C	R180 F183	R141 F144
BS04	dna	C	R167 Y170 R178 K187 W188 Y193 N194 K196	R128 Y131 R139 K148 W149 Y154 N155 K157
BS05	SFG	C	D40 D59 S72 H214 T216 Q217 K218 F241 S244 T246 E262 I263 Y267	D9 D28 S36 H175 T177 Q178 K179 F202 S205 T207 E222 I223 Y227

External links

PDB	RCSB:9c3u, PDBe:9c3u, PDBj:9c3u
PDBsum	9c3u
PubMed	39244607
UniProt	A0A8I1DKW0

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