Structure of PDB 9bf5 Chain C

Receptor sequence
>9bf5C (length=1190) Species: 666 (Vibrio cholerae) [Search protein sequence]
MNVSIEEFTHFDFQLVPEPSPLDLVITEPLKNHIEVNGVKSGALLPLPFQ
TGIGKTYTALNFLLQQMLEQVRSELKEENTGKKSKRLLYYVTDSVDNVVS
AKADLLKLIEKQTVKGEPRFTLEQQEYLKAQIVHLPNQSEQLLQCSDAVL
NDVLIGFNLNAERDVQAEWSAISGLRRHASNPEVKISLNRQAGYFYRNLI
DRLQKKQKGADRVLLSGSLLASVETLLPGEKIRNGSAHVAFLTTSKFLKG
FHNTRSRYSPLRDLSGAVLIIDEIDKQNQVILSELCKQQAQDLIWAIRTL
RANFRDHQLESSPRYDKIEDLFEPLRERLEEFGTNWNLAFAFNTEGANLN
ERPVRLFSDRSFTHVSSATHKLSLKSDFLRRKNLIFSDEKVEGSLIEKHG
LLTRFVNEADVIYQWFLGTMRKAVFQYWENVRGLEIEVRENRSLEGTFQE
AVQSLLTHFNLQEFESAVYESFDTRGLRQSAGGKANKLSSSKSYHHTGLK
LVEVAHNQGTRDTVNCKASFLNTSPSGVLADMVDAGAVILGISATARADT
VIHNFDFKYLNERLGNKLLSLSREQKQRVNNYYHSRRNYKDNGVVLTVKY
LNSRDAFLDALLEEYKPEARSSHFILNHYLGIAESEQAFVRSWLSKLLAS
IKAFISSPDNRYMLSLLNRTLDTTRQNINDFIQFCCDKWAKEFNVKTKTF
FGVNADWMRLVGYDEISKHLNTELGKVVVFSTYASMGAGKNPDYAVNLAL
EGESLISVADVTYSTQLRSDIDSIYLEKPTQLLLSDDYSHTANQLCQFHQ
ILSLQENGELSPKSAENWCRQQLMGMSRERSLQQYHQTSDYQSAVRKYIE
QAVGRAGRTSLKRKQILLFVDSGLKEILAEESRDPSLFSHEYVALVNKAK
SAGKSIVEDRAVRRLFNLAQRNNKDGMLSIKALVHRLHNQPASKSDIQEW
QDIRTQLLRYPTVAFQPERFNRLYLQSMTKGYYRYQGNLDGDPNSFEFFD
RVPYGDMVSEEDCSLATLVQNQYVRPWFERKGFACSWQKEANVMTPIMFT
NIYKGALGEQAVEAVLTAFDFTFEEVPNSIYERFDNRVIFAGIEQPIWLD
SKYWKHEGNESSEGYSSKIALVEEEFGPSKFIYVNALGDTSKPIRYLNSC
FVETSPQLAKVIEIPALIDDSNADTNRTAVQELIKWLHHS
3D structure
PDB9bf5 DdmDE eliminates plasmid invasion by DNA-guided DNA targeting.
ChainC
Resolution3.07 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna C Q138 G193 Y194 R197 K249 R669 T670 S735 Q781 D787 E829 L832 Q138 G193 Y194 R197 K249 R669 T670 S735 Q781 D787 E829 L832
External links