Structure of PDB 8yf8 Chain C

Receptor sequence

>8yf8C (length=305) Species: 292633 (Dragon grouper nervous necrosis virus) [Search protein sequence]

RSNRTDAPVSKASTVTGFGRGTNDVHLSGMSRISQAVLPAGTGTDGYVVV
DATIVPDLLPRLGHAARIFQRYAVETLEFEIQPMCPANTGGGYVAGFLPD
PTDNDHTFDALQATRGAVVAKWWESRTVRPQYTRTLLWTSSGKEQRLTSP
GRLILLCVGNNTDVVNVSVLCRWSVRLSVPSLETPEETTAPIMTQGSLYN
DSLSTNDFKSILLGSTPLDIAPDGAVFQLDRPLSIDYSLGTGDVDRAVYW
HLKKFAGNAGTPAGWFRWGIWDNFNKTFTDGVAYYSDEQPRQILLPVGTV
CTRVD

3D structure

PDB

8yf8 Molecular Mechanism of pH-Induced Protrusion Configuration Switching in Piscine Betanodavirus Implies a Novel Antiviral Strategy.

Chain

Resolution

3.52 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	CA	C	D130 D133	D100 D103
BS02	CA	C	S170 E213	S140 E183

External links

PDB	RCSB:8yf8, PDBe:8yf8, PDBj:8yf8
PDBsum	8yf8
PubMed	39087906
UniProt	Q9E6H7

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