Structure of PDB 8yf6 Chain C

Receptor sequence

>8yf6C (length=181) Species: 292633 (Dragon grouper nervous necrosis virus) [Search protein sequence]

TDAPVSKASTVTGFGRGTNDVHLSGMSRISQAVLPAGTGTDGYVVVDATI
VPDLLPRLGHAARIFQRYAVETLEFEIQPMCPANTGGGYVAGFLPDPTDN
DHTFDALQATRGAVVAKWWESRTVRPQYTRTLLWTSSGKEQRLTSPGRLI
LLCVGNNTDVVNVSVLCRWSVRLSVPSLETP

3D structure

PDB

8yf6 Molecular Mechanism of pH-Induced Protrusion Configuration Switching in Piscine Betanodavirus Implies a Novel Antiviral Strategy.

Chain

Resolution

3.23 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	CA	C	D130 D133	D96 D99
BS02	CA	C	Q100 S170 E213	Q66 S136 E179

External links

PDB	RCSB:8yf6, PDBe:8yf6, PDBj:8yf6
PDBsum	8yf6
PubMed	39087906
UniProt	Q9E6H7

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