Structure of PDB 8xlp Chain C
Receptor sequence
>8xlpC (length=434) Species:
52970
(Rhodomonas salina) [
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AGRDIESTGFAWWSGNSRLINVSGKLLGAHVAHAGLMVFWCGAMTLFEVA
HYIPEKPLYEQGLILLPHLATLGWGVGPGGEIVDIYPYFVVGILHIISSA
VLGFGGVYHSLIGPDTLEESFPAFGYDWRDKNKITTILGIHLVILGFGAL
LLVVKAMYVGGLYDTWAPGGGDVRIIDNPTLNPVVIIGYVLKSPWGGDGW
IVSVNNMEDIVGGHIWIGFTCIAGGFWHILTKPFAWARRAYVWSGEAYLS
YSLVAVSLMGFIASQYSWYNNTAYPSEFYGPTGPEASQSQAFTFLVRDQR
LGASVASAQGPTGLGKYLMRSPSGEIILGGETQRFWDLRAPWIEPLRGPN
GLDLNKIKNDIQPWQERRAAEYMTHAPLGSFVSPRSWLTCAHFLLGFVFY
IGHLWHAGRARAAAAGFEKGINRENEPTLSLRPI
3D structure
PDB
8xlp
Structure of inactive Photosystem II associated with CAC antenna from Rhodomonas Salina
Chain
C
Resolution
2.57 Å
3D
structure
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Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
CLA
C
A186 L189 H251 I254 M296 A310 Y311
A149 L152 H214 I217 M259 A273 Y274
BS02
CLA
C
W77 H105 K192 V293 M296 A300 Y311 H444 L447 F451
W40 H68 K155 V256 M259 A263 Y274 H392 L395 F399
BS03
CLA
C
M74 V75 C78 T82 L102 L106 V128 H132 M296
M37 V38 C41 T45 L65 L69 V91 H95 M259
BS04
CLA
C
W77 M81 F84 G99 I101 W439
W40 M44 F47 G62 I64 W387
BS05
CLA
C
Y278 Y288 V291 Y452 H455 L456 A459 R463
Y241 Y251 V254 Y400 H403 L404 A407 R411
BS06
CLA
C
L175 L179 T257 G261 W264 H265 P270 F271 W273 Y278
L138 L142 T220 G224 W227 H228 P233 F234 W236 Y241
BS07
CLA
C
I171 L175 L179 L182 W280 Y285 Y288 A292
I134 L138 L142 L145 W243 Y248 Y251 A255
BS08
CLA
C
W50 S51 N53 S54 L286 L290 V450 F451 G454 W457 H458
W13 S14 N16 S17 L249 L253 V398 F399 G402 W405 H406
BS09
CLA
C
N53 L56 L63 A66 H67 H70 M74 Y163 W165 G282 E283 Y285 L286 S289
N16 L19 L26 A29 H30 H33 M37 Y126 W128 G245 E246 Y248 L249 S252
BS10
CLA
C
N53 H70 L73 M74 W77 F451
N16 H33 L36 M37 W40 F399
BS11
CLA
C
R40 W49 G52 N53 R55 L56 K62 A66 L148
R3 W12 G15 N16 R18 L19 K25 A29 L111
BS12
CLA
C
H67 F161 Y163 I177 H178 V180 I181 F184
H30 F124 Y126 I140 H141 V143 I144 F147
BS13
CLA
C
L64 V68 V138 G142 Y145 H146 F158 F161
L27 V31 V101 G105 Y108 H109 F121 F124
BS14
WVN
C
I130 I134 S135
I93 I97 S98
BS15
WVN
C
V227 I238 G250 H251 I254 Y278
V190 I201 G213 H214 I217 Y241
BS16
WVN
C
L73 F76 I130 I133 S136 A137 G140
L36 F39 I93 I96 S99 A100 G103
External links
PDB
RCSB:8xlp
,
PDBe:8xlp
,
PDBj:8xlp
PDBsum
8xlp
PubMed
UniProt
A6MVR2
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