Structure of PDB 8wzm Chain C
Receptor sequence
>8wzmC (length=497) Species:
9606
(Homo sapiens) [
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RDPASDQMQHWKEQRAAQKADVLTTGAGNPVGDKLNVITVGPRGPLLVQD
VVFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITKYSKAKVFEHIG
KKTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFF
IRDPILFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSDRG
IPDGHRHMNGYGSHTFKLVNANGEAVYCKFHYKTDQGIKNLSVEDAARLS
QEDPDYGIRDLFNAIATGKYPSWTFYIQVMTFNQAETFPFNPFDLTKVWP
HKDYPLIPVGKLVLNRNPVNYFAEVEQIAFDPSNMPPGIEASPDKMLQGR
LFAYPDTHRHRLGPNYLHIPVNCPYRARVANYQRDGPMCMQDNQGGAPNY
YPNSFGAPEQQPSALEHSIQYSGEVRRFNTANDDNVTQVRAFYVNVLNEE
QRKRLCENIAGHLKDAQIFIQKKAVKNFTEVHPDYGSHIQALLDKYN
3D structure
PDB
8wzm
Factors affecting macromolecule orientations in thin films formed in cryo-EM.
Chain
C
Resolution
2.7 Å
3D
structure
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Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
HEM
C
R72 V74 H75 R112 G131 V146 G147 N148 P158 F161 S217 F334 M350 R354 Y358 T361 H362 R365
R68 V70 H71 R108 G127 V142 G143 N144 P154 F157 S213 F330 M346 R350 Y354 T357 H358 R361
BS02
NDP
C
P151 H194 F198 S201 R203 K237 V302 W303 H305 K306 Q442 F446 V450
P147 H190 F194 S197 R199 K233 V298 W299 H301 K302 Q438 F442 V446
Gene Ontology
Molecular Function
GO:0004046
aminoacylase activity
GO:0004096
catalase activity
GO:0004601
peroxidase activity
GO:0016209
antioxidant activity
GO:0016684
oxidoreductase activity, acting on peroxide as acceptor
GO:0019899
enzyme binding
GO:0020037
heme binding
GO:0042802
identical protein binding
GO:0042803
protein homodimerization activity
GO:0046872
metal ion binding
GO:0050661
NADP binding
Biological Process
GO:0000302
response to reactive oxygen species
GO:0001649
osteoblast differentiation
GO:0001657
ureteric bud development
GO:0001666
response to hypoxia
GO:0001822
kidney development
GO:0006641
triglyceride metabolic process
GO:0006979
response to oxidative stress
GO:0008203
cholesterol metabolic process
GO:0009060
aerobic respiration
GO:0009410
response to xenobiotic stimulus
GO:0009411
response to UV
GO:0009636
response to toxic substance
GO:0009642
response to light intensity
GO:0009650
UV protection
GO:0010193
response to ozone
GO:0010288
response to lead ion
GO:0014823
response to activity
GO:0014854
response to inactivity
GO:0020027
hemoglobin metabolic process
GO:0032355
response to estradiol
GO:0032868
response to insulin
GO:0033189
response to vitamin A
GO:0033197
response to vitamin E
GO:0033591
response to L-ascorbic acid
GO:0042542
response to hydrogen peroxide
GO:0042744
hydrogen peroxide catabolic process
GO:0043066
negative regulation of apoptotic process
GO:0045471
response to ethanol
GO:0046686
response to cadmium ion
GO:0051781
positive regulation of cell division
GO:0051897
positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction
GO:0055093
response to hyperoxia
GO:0061692
cellular detoxification of hydrogen peroxide
GO:0070542
response to fatty acid
GO:0071363
cellular response to growth factor stimulus
GO:0072722
response to amitrole
GO:0080184
response to phenylpropanoid
Cellular Component
GO:0005576
extracellular region
GO:0005615
extracellular space
GO:0005737
cytoplasm
GO:0005739
mitochondrion
GO:0005777
peroxisome
GO:0005778
peroxisomal membrane
GO:0005782
peroxisomal matrix
GO:0005829
cytosol
GO:0005925
focal adhesion
GO:0016020
membrane
GO:0032991
protein-containing complex
GO:0034774
secretory granule lumen
GO:0043231
intracellular membrane-bounded organelle
GO:0062151
catalase complex
GO:0070062
extracellular exosome
GO:1904813
ficolin-1-rich granule lumen
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:8wzm
,
PDBe:8wzm
,
PDBj:8wzm
PDBsum
8wzm
PubMed
38935342
UniProt
P04040
|CATA_HUMAN Catalase (Gene Name=CAT)
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