Structure of PDB 8wt9 Chain C

Receptor sequence

>8wt9C (length=318) Species: 562 (Escherichia coli) [Search protein sequence]

LHYIGIDTAKEKLDVDVLRPDGRHRTKKFANTTKGHDELVSWLKGHKIDH
AHICIEATGTYMEPVAECLYDAGYIVSVINPALGKAFAQSEGLRNKTDTV
DARMLAEFCRQKRPAAWEAPHPLERALRALVVRHQALTDMHTQELNRTET
AREVQRPSIDAHLLWLEAELKRLEKQIKDLTDDDPDMKHRRKLLESIPGI
GEKTSAVLLAYIGLKDRFAHARQFAAFAGLTPRRYESGSSVRGASRMSKA
GHVSLRRALYMPAMVATSKTEWGRAFRDRLAANGKKGKVILGAMMRKLAQ
VAYGVLKSGVPFDASRHN

3D structure

PDB

8wt9 Structural mechanism of bridge RNA-guided recombination.

Chain

Resolution

2.7 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	rna	C	L97 R98 K100	L93 R94 K96
BS02	rna	C	A61 T64 N84 D143 Q147 N150 R151 R221 F222 R226 Q227 F231 T235 P236 R238 S249 R250 M251 K253 A254 G255 H256 R260 R261 Y264 R283 K289 K290 K292 V293 G296 A297 R300 K301 G308 V309 S312 F316 D317 R320 H321	A57 T60 N80 D139 Q143 N146 R147 R217 F218 R222 Q223 F227 T231 P232 R234 S245 R246 M247 K249 A250 G251 H252 R256 R257 Y260 R279 K285 K286 K288 V289 G292 A293 R296 K297 G304 V305 S308 F312 D313 R316 H317
BS03	dna	C	A13 K14 T62 Y65 P85 A86 K89 A248 K253 A254	A9 K10 T58 Y61 P81 A82 K85 A244 K249 A250
BS04	dna	C	S241 G242 S244	S237 G238 S240
BS05	dna	C	R250 Y264 M268 K273 G291 L295	R246 Y260 M264 K269 G287 L291
BS06	dna	C	T146 N150 E153 P202 G203 G205 K207 T208 M265 V269 K273	T142 N146 E149 P198 G199 G201 K203 T204 M261 V265 K269

External links

PDB	RCSB:8wt9, PDBe:8wt9, PDBj:8wt9
PDBsum	8wt9
PubMed	38926616
UniProt	A0A2X3M8B0

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