Structure of PDB 8wt6 Chain C

Receptor sequence

>8wt6C (length=305) Species: 562 (Escherichia coli) [Search protein sequence]

LHYIGIDTAKEKLDVDVLRPDGRHRTKKFANTTKGHDELVSWLKGHKIDH
AHICIEATGTYMEPVAECLYDAGYIVSVINPALGKAFAQSEGLRNKTDTV
DARMLAEFCRQKRPAAWEAPHPLERALRALVVRHQALTDMHTQELNRTET
AREVQRPSIDAHLLWLEAELKRLEKQIKDLTDDDPDMKHRRKLLESIPGI
GEKTSAVLLAYIGLKDRFAHARQFAAFAGLTPRRMSKAGHVSLRRALYMP
AMVATSKTEWGRAFRDRLAANGKKGKVILGAMMRKLAQVAYGVLKSGVPF
DASRH

3D structure

PDB

8wt6 Structural mechanism of bridge RNA-guided recombination.

Chain

Resolution

2.5 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	rna	C	R98 N99	R94 N95
BS02	rna	C	A61 G63 T64 N84 P85 D143 Q147 N150 R151 R221 F222 H224 R226 Q227 F231 T235 P236 M251 K253 A254 G255 H256 R260 R261 Y264 R283 K289 K290 K292 V293 G296 A297 R300 K301 G308 V309 F316 D317 R320 H321	A57 G59 T60 N80 P81 D139 Q143 N146 R147 R217 F218 H220 R222 Q223 F227 T231 P232 M235 K237 A238 G239 H240 R244 R245 Y248 R267 K273 K274 K276 V277 G280 A281 R284 K285 G292 V293 F300 D301 R304 H305
BS03	dna	C	D11 K14 E60 T62 Y65 P85 K89 K100 M268 S272 K273 G291 L295	D7 K10 E56 T58 Y61 P81 K85 K96 M252 S256 K257 G275 L279
BS04	dna	C	G203 G205 K207 T208 M265 V269 K273	G199 G201 K203 T204 M249 V253 K257
BS05	MG	C	D11 E60	D7 E56

External links

PDB	RCSB:8wt6, PDBe:8wt6, PDBj:8wt6
PDBsum	8wt6
PubMed	38926616
UniProt	A0A2X3M8B0

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