Structure of PDB 8wh5 Chain C

Receptor sequence
>8wh5C (length=88) Species: 3702 (Arabidopsis thaliana) [Search protein sequence]
KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNA
ARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGV
3D structure
PDB8wh5 Molecular basis of chromatin remodelling by DDM1 involved in plant DNA methylation.
ChainC
Resolution3.58 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna C R43 V44 G45 K76 R78 R23 V24 G25 K56 R58
BS02 dna C R30 R33 R78 R10 R13 R58
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0005515 protein binding
GO:0030527 structural constituent of chromatin
GO:0046982 protein heterodimerization activity
Biological Process
GO:0009294 DNA-mediated transformation
GO:0009611 response to wounding
GO:0009617 response to bacterium
Cellular Component
GO:0000786 nucleosome
GO:0005634 nucleus
GO:0005694 chromosome
GO:0005730 nucleolus
GO:0009536 plastid

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8wh5, PDBe:8wh5, PDBj:8wh5
PDBsum8wh5
PubMed38413824
UniProtQ9LD28|H2A6_ARATH Histone H2A.6 (Gene Name=RAT5)

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