Structure of PDB 8vzx Chain C

Receptor sequence

>8vzxC (length=133) Species: 9606 (Homo sapiens)

TRDQNGTWEMESNENFEGYMKALDIDFATRKIAVRLTQTLVIDQDGDNFK
TKATSTFFNYDVDFTVGVEFDEYTKSLDNRHVKALVTWEGDVLVCVQKGE
KENRGWKKWIEGDKLYLELTCGDQVCRQVFKKK

3D structure

• PDB: 8vzx Regulation of Emission via a Protein-Bound Fluorophore
• Chain: C
• Resolution: 1.47 Å

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	A1AEQ	C	F16 Y19 M20 A53 F58 Y60 L77 K108	F16 Y19 M20 A53 F58 Y60 L77 K108

Gene Ontology

Molecular Function

• GO:0005501 retinoid binding
• GO:0005504 fatty acid binding
• GO:0008289 lipid binding
• GO:0016918 retinal binding
• GO:0019841 retinol binding

Biological Process

• GO:0006776 vitamin A metabolic process
• GO:0008544 epidermis development
• GO:0015908 fatty acid transport

Cellular Component

• GO:0005634 nucleus
• GO:0005737 cytoplasm
• GO:0005829 cytosol

External links

• PDB: RCSB:8vzx, PDBe:8vzx, PDBj:8vzx
• PDBsum: 8vzx
• PubMed: 39046136
• UniProt: P50120|RET2_HUMAN Retinol-binding protein 2 (Gene Name=RBP2)