Structure of PDB 8tri Chain C

Receptor sequence

>8triC (length=419) Species: 10090 (Mus musculus) [Search protein sequence]

SDVNDNRPVFVRPPNGTILHIKEEIPLRSNVYEVYATDNDEGLNGAVRYS
FLKTTGNRDWEYFTIDPISGLIQTAQRLDREKQAVYSLILVASDLGQPVP
YETMQPLQVALEDIDDNEPLFVRPPKGSPQYQLLTVPEHSPRGTLVGNVT
GAVDADEGPNAIVYYFIAAGDEDKNFHLQPDGRLLVLRDLDRETEATFSF
IVKASSNRSWTPPALDLLTDLTLQEVRVVLEDINDQPPRFTKAEYTAGVA
TDAKVGSELIQVLALDADIGNNSLVFYGILVFTMGSVDGILRTAVDIVAR
DLAGHNDTAIIGIYILRDDQRVKIVINEIPDRVRGFEEEFIRLLSNITGA
IVNTDDVQFHVDMKGRVNFAQTELLIHVVNRDTNRILDVDRVIQMIDENK
EQLRNLFRNYNVLDVQPAI

3D structure

PDB

8tri Crystal Structure of Mouse Cadherin-23 EC25-MAD28 F2894A

Chain

Resolution

3.716 Å

3D
structure

[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	CA	C	N2582 N2584 D2616 D2618 N2622 D2672	N4 N6 D38 D40 N44 D94
BS02	CA	C	D2693 N2695 D2732 D2734 N2738	D115 N117 D154 D156 N160
BS03	CA	C	E2601 E2659 D2691 I2692 D2694 D2734	E23 E81 D113 I114 D116 D156
BS04	CA	C	E2601 E2602 D2657 E2659 D2694	E23 E24 D79 E81 D116
BS05	CA	C	E2716 R2770 E2771 D2815 I2816 D2818 D2851	E138 R192 E193 D232 I233 D235 D268
BS06	CA	C	N2817 D2849 D2851 N2855 D2913 H2917	N234 D266 D268 N272 D301 H305

External links

PDB	RCSB:8tri, PDBe:8tri, PDBj:8tri
PDBsum	8tri
PubMed
UniProt	Q99PF4\|CAD23_MOUSE Cadherin-23 (Gene Name=Cdh23)

[Back to BioLiP]