Structure of PDB 8r56 Chain C

Receptor sequence
>8r56C (length=671) Species: 592022 (Priestia megaterium DSM 319) [Search protein sequence]
KGVNVEILQDGFEVALNGVVLLQHTIQKPMLFVGHGEETIEMYRGNFDIK
DYVTERTALRYANVEEMEGAYKIDLSNLKNGDTMLSLIVKEEENRLKVEY
QKNDANINRFWLRVAADKQEKVYGCGEQLSHFNMRGKNFPLWTSEPGVGR
NKQTYVTWQADVVDKAGGDYYNTNFPQPTYVSSKKYYCHVETTAYADFDF
RNEAFHELQVWEVPKYMLFETADTYLELVEKITGLFGRQPELPEWVYNGV
VLGIQGGTDVVEQKLEKVLAKGMKVSGVWCQDWQGKRITSFGKRLMWNWK
WNESEYPELDKKIAEWKENDIRFLGYINPYVAIEGDLYKEAEDKGYLALN
TEGNTYLVDFGEFYCGVVDFTNEEATEWYKQVIKENMIDFGLDGWMADFG
EYLPTDVVLKNRIDAKIMHNAWPTMWAKVNYEAVSEAGKLGEIVYFMRAG
YTGIQKYCTLLWGGDQSVDWSLDDGLASVIPAALSSGMIGCGLHHSDIGG
YTSLHGNKRSKELLMRWAEMGAFTPMMRTHEGNRPDDCFQFDGDEETLEH
LARMSNVYVTMAPYIKSLVEENARRGIPVQRPLFMHYEEDEKTYDIQYQY
LFGEDVLVAPVHQENQTEWEVYLPEDQWVHVWSGEAYTGGSVTVQAPLGY
PPVFYRKKSIWSELFSKLIHI
3D structure
PDB8r56 Detection of Sulfoquinovosidase Activity in Cell Lysates Using Activity-Based Probes.
ChainC
Resolution2.45 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 3.2.1.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 Y2W C Q289 R302 L303 W305 Y334 M404 D406 F407 W470 D473 Y509 H538 Q281 R294 L295 W297 Y326 M396 D398 F399 W462 D465 Y501 H530
Gene Ontology
Molecular Function
GO:0003824 catalytic activity
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016798 hydrolase activity, acting on glycosyl bonds
GO:0030246 carbohydrate binding
Biological Process
GO:0005975 carbohydrate metabolic process

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:8r56, PDBe:8r56, PDBj:8r56
PDBsum8r56
PubMed38647177
UniProtD5E1T0

[Back to BioLiP]