Structure of PDB 8kcb Chain C

Receptor sequence
>8kcbC (length=89) Species: 3702 (Arabidopsis thaliana) [Search protein sequence]
ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAGESSKLARYN
KKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS
3D structure
PDB8kcb Mechanism of heterochromatin remodeling revealed by the DDM1 bound nucleosome structures.
ChainC
Resolution3.17 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna C E55 I59 Y60 E1 I5 Y6
BS02 dna C F62 I74 P107 T108 F8 I20 P53 T54
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0005515 protein binding
Cellular Component
GO:0000786 nucleosome
GO:0005634 nucleus
GO:0005694 chromosome
GO:0005730 nucleolus
GO:0009536 plastid

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Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:8kcb, PDBe:8kcb, PDBj:8kcb
PDBsum8kcb
PubMed38870940
UniProtQ9FFC0|H2B10_ARATH Histone H2B.10 (Gene Name=At5g22880)

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