Structure of PDB 8k27 Chain C

Receptor sequence
>8k27C (length=302) Species: 979527 (Vibrio phage ICP1_2004_A) [Search protein sequence]
TKLKAPAVLAYSRKINPTNALMFAVNWSDRDNTTAVMVGTKTVAGTQSVR
GNPNDADKGNIQTVNFANLPHNKNTLLVKYNVKFVGDVFKAELGGGEYSN
TLQTALENTDFGTLAYRYVYNIAAGRTLWRNRVGAESIETVITVNDQTFT
FSDLLVNEFDEDVDVAEIADMVAGVLSGEGFVTLKVEHYMLLGEGSEVFP
SQEFVENSKLSKQLFDLNGQAAMHDQKIGNAIRTIDTWYEDATTPIAVEP
YGSVVRNGVAYRAGNKTDLFTLMDGAVNGKSLTEEDQMFVTANLIRGGVF
GG
3D structure
PDB8k27 Structure of csy complex with short DNA
ChainC
Resolution3.6 Å
3D
structure
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Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 rna C Y12 S13 R14 V44 A45 Q63 E93 L94 R131 Q203 F205 H225 K228 N231 R257 G299 V300 Y11 S12 R13 V43 A44 Q62 E92 L93 R130 Q202 F204 H224 K227 N230 R256 G298 V299
BS02 dna C K3 G60 N61 I62 Q63 S212 K2 G59 N60 I61 Q62 S211
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