Structure of PDB 8j3s Chain C

Receptor sequence
>8j3sC (length=208) Species: 10359 (Human betaherpesvirus 5) [Search protein sequence]
TPVYVGGFLARYDQSPDEAELLLPRDVVEHWLHAVALPLNINHDDTAVVG
HVAAMQSVRDGLFCLGCVTSPRFLEIVRRASEKSELVSRGPVSPLQPDKV
VEFLSGSYAGLSLSSPFKHVALCSVGRRRGTLAVYGRDPEWVTQRFPDLT
AADRDGLRAQWQGDPFRSDSYGLLGNSVDALYIRERLPKLRYDKQLVGVT
ERESYVKA
3D structure
PDB8j3s Peptide-to-Small Molecule: Discovery of Non-Covalent, Active-Site Inhibitors of beta-Herpesvirus Proteases
ChainC
Resolution3.09 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.4.21.97: assemblin.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide C E31 N62 H63 S132 L133 S134 S135 K156 C161 V163 G164 R165 D227 I231 K237 E20 N42 H43 S112 L113 S114 S115 K118 C123 V125 G126 R127 D179 I183 K189
Gene Ontology
Molecular Function
GO:0004252 serine-type endopeptidase activity
Biological Process
GO:0006508 proteolysis

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Molecular Function
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Biological Process
External links
PDB RCSB:8j3s, PDBe:8j3s, PDBj:8j3s
PDBsum8j3s
PubMed37974946
UniProtP16753|SCAF_HCMVA Capsid scaffolding protein (Gene Name=UL80)

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