Structure of PDB 8hxy Chain C

Receptor sequence
>8hxyC (length=109) Species: 8355 (Xenopus laevis) [Search protein sequence]
RAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTA
EILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPN
IQSVLLPKK
3D structure
PDB8hxy Structure of histone deacetylase complex Rpd3S bound to nucleosome
ChainC
Resolution3.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna C R11 K13 R29 R42 V43 G44 A45 K75 T76 R77 R1 K3 R19 R32 V33 G34 A35 K65 T66 R67
BS02 dna C R11 A12 K15 T16 R17 R29 R32 R77 R1 A2 K5 T6 R7 R19 R22 R67
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0030527 structural constituent of chromatin
GO:0046982 protein heterodimerization activity
Cellular Component
GO:0000786 nucleosome
GO:0005634 nucleus
GO:0005694 chromosome

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Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:8hxy, PDBe:8hxy, PDBj:8hxy
PDBsum8hxy
PubMed37798513
UniProtP06897|H2A1_XENLA Histone H2A type 1

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