Structure of PDB 8hpd Chain C

Receptor sequence
>8hpdC (length=221) Species: 325651 (Bryopsis corticulans) [Search protein sequence]
VEWYGPGRELWLGPYSSGAVPSYLTGEFPGDYGWDTAGLSADPESFRRYR
EIELIHARWAMMGTVGCLTPEALERYTGATFGESVWFKAGAQIFSDDGLN
YLGKPELIHAQSILAIVWTQVLIMGFAEGYRVNGGPAGEGLDRLYPGEAF
DPLGLADDPETFAELKIKEIKNGRLAMFAMFGFFVQAIQTGKGPVECWAE
HVADPFGSNGFNVDQMSKFLF
3D structure
PDB8hpd Structural and functional properties of different types of siphonous LHCII trimers from an intertidal green alga Bryopsis corticulans.
ChainC
Resolution2.74 Å
3D
structure
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Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 CHL C M216 S217 F219 M216 S217 F219
BS02 0UR C M61 T64 F150 D151 P152 L153 A176 A179 F183 Q186 P194 M61 T64 F150 D151 P152 L153 A176 A179 F183 Q186 P194
BS03 0IE C W34 D35 T36 A37 W59 A60 G63 G66 C67 W86 M177 M180 W34 D35 T36 A37 W59 A60 G63 G66 C67 W86 M177 M180
BS04 0IE C Q189 G210 F211 M216 F219 L220 Q189 G210 F211 M216 F219 L220
BS05 CHL C W11 L12 G13 Y15 W34 W11 L12 G13 Y15 W34
BS06 CHL C G30 D31 Y32 W34 D35 L39 S40 Y49 R50 E53 H56 R174 M177 F178 F181 G30 D31 Y32 W34 D35 L39 S40 Y49 R50 E53 H56 R174 M177 F178 F181
BS07 CLA C H56 F181 F184 H56 F181 F184
BS08 CLA C G66 F81 L99 Y101 L102 G66 F81 L99 Y101 L102
BS09 CHL C E106 L107 I108 H109 Q111 S112 E106 L107 I108 H109 Q111 S112
BS10 CHL C I108 I116 I108 I116
BS11 CHL C F87 G90 F94 Q120 F87 G90 F94 Q120
BS12 CHL C R58 W59 Y130 R131 G134 G135 P136 A137 P146 F150 R58 W59 Y130 R131 G134 G135 P136 A137 P146 F150
BS13 CHL C E51 I52 I55 H56 W59 Q120 M124 G125 E128 R131 E51 I52 I55 H56 W59 Q120 M124 G125 E128 R131
BS14 CLA C R58 M61 Y145 P146 G147 F150 D151 L155 A156 F162 L165 K166 E169 R58 M61 Y145 P146 G147 F150 D151 L155 A156 F162 L165 K166 E169
BS15 CLA C W3 K168 K171 N172 L175 W3 K168 K171 N172 L175
BS16 CLA C K168 N172 L175 K168 N172 L175
BS17 CLA C F178 F181 G182 V185 Q186 T190 C197 H201 G210 F178 F181 G182 V185 Q186 T190 C197 H201 G210
BS18 CHL C H201 P205 F206 F211 H201 P205 F206 F211
Gene Ontology
--> -->
 
 
UnboundLocalError
Python 3.6.8: /usr/bin/python3
Sun Feb 16 23:54:36 2025

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)
   1444         else:
=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)
   1446     
   1447     uniprot_line=''
pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '8hpd', asym_id = 'C', title = 'Structural and functional properties of differen...m an intertidal green alga Bryopsis corticulans. '
 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='8hpd', asym_id='C', title='Structural and functional properties of differen...m an intertidal green alga Bryopsis corticulans. ')
    839 
    840     if go:
=>  841         display_go(go,uniprot,pdbid,asym_id)
    842     return pubmed,uniprot
    843 
global display_go = <function display_go>, go = '0009765,0016020', uniprot = '', pdbid = '8hpd', asym_id = 'C'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0009765,0016020', uniprot='', pdbid='8hpd', asym_id='C')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>