Structure of PDB 8grq Chain C

Receptor sequence
>8grqC (length=110) Species: 9606 (Homo sapiens) [Search protein sequence]
ARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT
AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLP
NIQAVLLPKK
3D structure
PDB8grq Synthetic E2-Ub-nucleosome conjugates for studying nucleosome ubiquitination.
ChainC
Resolution3.87 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 dna C R11 A14 K15 R17 R20 R32 R2 A5 K6 R8 R11 R23
BS02 dna C R11 K13 R29 R42 V43 A45 K75 T76 R2 K4 R20 R33 V34 A36 K66 T67
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0030527 structural constituent of chromatin
GO:0046982 protein heterodimerization activity
Cellular Component
GO:0000786 nucleosome

View graph for
Molecular Function

View graph for
Cellular Component
External links
PDB RCSB:8grq, PDBe:8grq, PDBj:8grq
PDBsum8grq
PubMed
UniProtP04908|H2A1B_HUMAN Histone H2A type 1-B/E (Gene Name=H2AC4)

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