Structure of PDB 8ekl Chain C

Receptor sequence
>8eklC (length=355) Species: 645463 (Clostridioides difficile R20291) [Search protein sequence]
EDLDTDNDNIPDSYERNGYTIKDLIAVKWEDSFAEQGYKKYVSNYLESNT
AGDPYTDYEKASGSFDKAIKTEARDPLVAAYPIVGVGMEKLIISTNEHAS
TDQGKTVSNGESWNTGLSINKGESAYINANVRYYNTGTAPMYKVTPTTNL
VLDGDTLSTIKAQENQIGNNLSPGDTYPKKGLSPLALNTMDQFSSRLIPI
NYDQLKKLDAGKQIKLETTQVSGNFGTKNSSGQIVTEGNSWSDYISQIDS
ISASIILDTENESYERRVTAKNLQDPEDKTPELTIGEAIEKAFGATKKDG
LLYFNDIPIDESCVELIFDDNTANKIKDSLKTLSDKKIYNVKLERGMNIL
IKTPT
3D structure
PDB8ekl Calcium-mediated Pore Formation of Clostridioides difficile Binary Toxin
ChainC
Resolution3.06 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA C D220 D222 D224 I226 P227 E231 D4 D6 D8 I10 P11 E15
BS02 CA C D222 D224 E231 N260 E263 D273 D6 D8 E15 N44 E47 D57
Gene Ontology
Biological Process
GO:0051260 protein homooligomerization
Cellular Component
GO:0005576 extracellular region

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Biological Process
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Cellular Component
External links
PDB RCSB:8ekl, PDBe:8ekl, PDBj:8ekl
PDBsum8ekl
PubMed
UniProtA0A9R0BM17

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