Structure of PDB 8dy7 Chain C

Receptor sequence
>8dy7C (length=1118) Species: 54571 (Streptomyces venezuelae) [Search protein sequence]
ASTAPLRISFAKIKEPLEVPNLLALQTESFDWLLGNAAWKARVEAALESG
QDVPTKSGLEEIFEEISPIEDFSGSMSLTFRDHRFEPPKNSIDECKDRDF
TYGAPLFVTAEFTNNETGEIKSQTVFMGDFPLMTNKGTFVINGTERVVVS
QLVRSPGVYFDSSIDKTSDKDIFSAKIIPSRGAWLEMEIDKRDLVGVRID
RKRKQSVTVLLKALGWTTEQILQEFGEYESMRATLEKDHTQGQDDALLDI
YRKLRPGEPPTREAAQTLLENLYFNPKRYDLAKVGRYKVNKKLGADEPLD
AGVLTTDDVIATIKYLVKLHAGETETIGENGNEIVVETDDIDHFGNRRLR
NVGELIQNQVRTGLARMERVVRERMTTQDVEAITPQTLINIRPVVASIKE
FFGTSQLSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGFEVRDVHPSH
YGRMCPIETPEGPNIGLIGSLASYGRVNAFGFIETPYRKVVDGQVTDEVD
YVTADEEDRFVIAQANAALDEELRFSENRVLVRKRGGEVDYVEPSDVDYM
DVSPRQMVSVATAMIPFLEHDDANRALMGANMMRQAVPLIKSEAPLVGTG
MEYRCATDAGDVLKAEKDGVVQELSADYITVANDDGTYITYRLHKFSRSN
QGTSVNQKVVVDEGDRVIEGQVLADGPATEDGEMALGKNLLVAFMPWEGH
NYEDAIILSQRLVQDDVLSSIHIEEHEVDARDTKLGPEEITRDIPNVSEE
VLADLDERGIIRIGAEVVAGDILVGKVTPKGETELTPEERLLRAIFGEKA
REVRDTSLKVPHGEIGKIIGVRVFDREEGDELPPGVNQLVRVYVAQKRKI
TDGDKLAGRHGNKGVISKILPIEDMPFLEDGTPVDIILNPLGVPSRMNPG
QVLEIHLGWLASRGWDVSGLADEWAQRLQAIGADKVAPGTNVATPVFDGA
REDELAGLLNHTIPNRDGERMVLPTGKARLFDGRSGEPFPDPISVGYMYI
LKLHHLVDDKLHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYG
AAYALQELLTIKSDDVTGRVKVYEAIVKGENIPEPGIPESFKVLIKEMQS
LCLNVEVLSSDGMSIEMR
3D structure
PDB8dy7 Structural basis of dual activation of cell division by the actinobacterial transcription factors WhiA and WhiB.
ChainC
Resolution3.18 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.7.7.6: DNA-directed RNA polymerase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna C R224 R235 R470 R192 R203 R438
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003899 DNA-directed 5'-3' RNA polymerase activity
GO:0016779 nucleotidyltransferase activity
GO:0032549 ribonucleoside binding
GO:0034062 5'-3' RNA polymerase activity
Biological Process
GO:0006351 DNA-templated transcription
Cellular Component
GO:0000428 DNA-directed RNA polymerase complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8dy7, PDBe:8dy7, PDBj:8dy7
PDBsum8dy7
PubMed36888660
UniProtF2RIS5

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