Structure of PDB 8djq Chain C

Receptor sequence
>8djqC (length=383) Species: 1078020 (Mycolicibacterium thermoresistibile ATCC 19527) [Search protein sequence]
LTDLKVRLVRDDFADAVAWVARSLPSRPTVPVLAGVLLTGSDDGLTISSF
DYEVSAEVQIPAEIAAPGTVLVSGRLLSEITRALPNKPVDLSVEGTRVSL
TCGSARFSLPTMAVEDYPALPELPAETGSVPADLFAEAIGQVAVAAGRDD
TLPMLTGIRVEISGDRMVLAATDRFRLAVRELTWTTKTPDVEAAVLVPAK
TLAEAAKTGLDGSEVQLALGADGLLGIRSEGKRSTTRLLDAEFPKFRQLL
PTEHTAMATIGVGELTEAIKRVALVADRGAQVRMEFADDVLHLSAGADDV
GRAEEDLPVSFSGEPLTIAFNPGYLTDGLGALHSERVTFGFTTPSKPAVL
RPATEADAALNGNGPFPAAETDYVYLLMPVRLP
3D structure
PDB8djq Interaction of the sliding clamp with mycobacterial polymerases
ChainC
Resolution2.8 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 peptide C T179 R181 F182 R183 L184 L262 S358 M391 P392 R394 T172 R174 F175 R176 L177 L249 S345 M378 P379 R381
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003887 DNA-directed DNA polymerase activity
GO:0008408 3'-5' exonuclease activity
Biological Process
GO:0006260 DNA replication
GO:0006271 DNA strand elongation involved in DNA replication
GO:0071897 DNA biosynthetic process
Cellular Component
GO:0005737 cytoplasm
GO:0009360 DNA polymerase III complex

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:8djq, PDBe:8djq, PDBj:8djq
PDBsum8djq
PubMed
UniProtG7CIP4

[Back to BioLiP]