Structure of PDB 8dgc Chain C

Receptor sequence
>8dgcC (length=2028) Species: 28901 (Salmonella enterica) [Search protein sequence]
SDSLLVRTSRDGDQFHYLWAARRALRLLEPQSTLVALTIEGASTTEMGSQ
PVVEDGEELIDIAEYYGSNELATATTVRYMQLKHSTMHSDTPFPPSGLQK
TIEGFATRYKALIQKIPVETLRTKLEFWFVTNRPVSSSFSEAINDAANQH
VTRHPHDLAKLEKFTGLQGAELSIFCQLLHIEGQQDDLWSQRNILLRESA
GYLPDLDTEAPLKLKELVNRKALTESAANPSITRMDVLRALGVDETDLFP
APCRIERIENSVSRTQEATLVQRVVEAFGAPVIIHADAGVGKSIFSTHIE
EHLPTGSVSILYDCFGLGQYRNASSYRHHHRTALVQMANEMASRGLCHPL
IPNAGTGISQYMRAFLHRLSQSISILRASEPLAVLCIIIDAADNAQMAAE
EIGETRSFIKDLIREKLPDGVCLVALCRPYRRELLDPPPEALTLSLQTFN
RDETAAHLHQKFPDASESDVDEFHRLSSCNPRVQALSLSQNLPLNDTLRL
LGPNPKTVEDTIGEVLEKSIARLRDTAGISERAQIDTICSALAILRPLIP
LSVLSAISGVAGSAIKSFALDLGRPLIVSGETIQFFDEPAETWFQRRFRP
SAADLHQFITKLRPLTKDSSYAASVLPALMLEGNQLSELIELAISSQALP
ETSAVERRDIELQRLQFALKAALRTGRYQDAAKLALKAGGECAGDNRQRV
LLRDNIDLAAKFVGSNGVQELVSRNAFPDTGWPGSRNAYYAAILSEYPEL
SGEARSRLRLTMEWLTNWSQLPDDERSRQNVTDQDRAVMLIACLNIHGAE
AAARELRRWRPRKLSFDAGKIVAMQLLAHARYDELDQLAIAAGNDISLVM
GIVLEARKLHRPVAEQAIRRTWRLLKSQRVSIKDRNHANNQTIAAITGMV
EMALIQSVCTESESIQLLDRYLPKVPPYALTSEYSKERVAYVRAYALQAN
LMGSQLALSDLASTEVKKELMAEKRHGESDDLRQLKQYSGVLIPWYNLWA
KVILGKTRKADLESELSDTQKESTAIKGHSYSEHSLSSNEIANVWFDILI
EAGNVSKDDVENIIKWSQHKGNRVFTPTLHRFSSVCAEISGLGELSYHFA
ELALSLWRDEHSDAQIKADGYIDLSRSLISLDEPEAKEYFNQAIEVTNKL
GDENLSRWEAILDLAEYVAGKTQVPPEISYKLARCAELTREYVDRDKHFA
WSDTVEILAELCPSSALAIISRWRDRTFGNHRSILAWTIEHLVKKNKINA
LDALPLITFENDWHKCDLLDSVLSSCTDDKDKIMAFEVVYHYTKFNVQNI
QNLKKLDAISTSLGIEHTELKERISGLQHGHDQEWESIFKDCDLSSIDGI
SAAYEKFRNVPEFYSKETFIKKAISRVKTGKECSFITAIGAIFHWGLYDF
KYILESIPDEWTSRLSIKTTLAGLIKEYCQRFCMRIRKSRVYEIFPFSLA
SRLSGISEKEIFGITLEAIAESPEPANSDRLFSLPGLLVSKLESNEALDV
LSYALDLFDEVLKDEDGDGPWNEKLSPPTHVEDSLAGYIWARLGSPEAEM
RWQAAHAVLALCRMSRTCVIQGIFQHAINATTLPFCDRNLPFYTLHAQLW
LMIAAARVALDDGKSLIPNIGYFYHYATTDQPHVLIRHFAARTLLALHDS
DLISIPAQEENKLRNINQSTTLPVEDSYTFGIDFGPYWLKPLGRCFGVSQ
KQLEPEMLRIIRDVLGFKGSRNWDEDERNKRRYYQDRDNHHSHGSYPRVD
DYHFYLSYHAMFMTAGQLLATKPLVGEDVFQDWLRRHDISRNDHRWLADR
RDIPPKERSSWLNSSSDNRDEWLASISENVFNETLCPSPGLLTLWGRWSD
VCSDRKESIIVHSALVSPERSLSLLRALQTTKNVYDYKIPDAQLKGWIKD
IAEYCGIDEFDPWAGNVRFPIPEPASFIIDAMKLTTDKDHRVWYSPSDVE
PAMISSIWGHLSGKNDEEKSHGYRLCASIHFIKSALETFNMDLILEVDVD
RYSRNSSTRLFLFRHDGTIHTLYGNYRN
3D structure
PDB8dgc Prokaryotic innate immunity through pattern recognition of conserved viral proteins.
ChainC
Resolution3.4 Å
3D
structure
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Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 ATP C G292 K293 S294 I295 R429 R483 G291 K292 S293 I294 R428 R482
External links