Structure of PDB 8d5n Chain C

Receptor sequence
>8d5nC (length=262) Species: 10090 (Mus musculus) [Search protein sequence]
GPHSMRYFETAVSRPGLGEPRYISVGYVDNKEFVRFDSDAENPRYEPQAP
WMEQEGPEYWERITQIAKGQEQWFRVNLRTLLGCYNQSAGGTHTLQWMYG
CDVGSDGRLLRGYEQFAYDGSDYIALNEDLKTWTAADMAAQITRRKWEQA
GAAEYYRAYLEGECVEWLHRYLKNGNATLLRTDSPKAHVTHHPREVTLRC
WALGFYPADITLTWQDMELVETRPAGDGTFQKWASVVVPLGKEQNYTCRV
YHEGLPEPLTLR
3D structure
PDB8d5n Peptide Centric V beta Specific Germline Contacts Shape a Specialist T Cell Response.
ChainC
Resolution1.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide C Y7 Y45 R62 I63 I66 G69 Q70 W73 N77 L81 C84 W97 Y99 Y123 A139 I142 T143 K146 W147 A150 Y156 Y159 W167 Y171 Y7 Y45 R62 I63 I66 G69 Q70 W73 N77 L81 C84 W97 Y99 Y123 A139 I142 T143 K146 W147 A150 Y156 Y159 W167 Y171
External links
PDB RCSB:8d5n, PDBe:8d5n, PDBj:8d5n
PDBsum8d5n
PubMed35967379
UniProtP01897|HA1L_MOUSE H-2 class I histocompatibility antigen, L-D alpha chain (Gene Name=H2-L)

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