Structure of PDB 8ci9 Chain C

Receptor sequence
>8ci9C (length=306) Species: 93608 (Sinopodophyllum hexandrum) [Search protein sequence]
LRLPVIDLSMKNLKPGTTSWNSVRTQVREALEEYGCFEAVIDAVSPELQK
AVCNKGHELLNLPLETKMLNGNKPEYDGFTSIPNLNEGMGVGRITDLEKV
ERFTNLMWPEGNKDFCETVYSYGKRMAEVDHILKMMVFESFGMEKHFDSF
CESTNYLLHFMRYQQPGKDGRSPALSLHKDKSILTIVNQNDVKGLEFETK
DGEWILPTADNHIVLLGDCFMAWSNGRLHSPLHRVTLVANQARLSTSSFS
FPKDIIETPAELVDEEHPLLFNPFEITELLAYCFTKEGAKAVCDLKQYKA
YTGALE
3D structure
PDB8ci9 Structure and mutation of deoxypodophyllotoxin synthase (DPS) from Podophyllum hexandrum
ChainC
Resolution1.41 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 1.14.20.8: (-)-deoxypodophyllotoxin synthase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 FE C H184 D186 H239 H178 D180 H233
Gene Ontology
Molecular Function
GO:0016706 2-oxoglutarate-dependent dioxygenase activity
GO:0046872 metal ion binding
GO:0051213 dioxygenase activity
Biological Process
GO:0009611 response to wounding
GO:0009699 phenylpropanoid biosynthetic process

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:8ci9, PDBe:8ci9, PDBj:8ci9
PDBsum8ci9
PubMed
UniProtA0A0N9HQ36|2ODD_SINHE Deoxypodophyllotoxin synthase (Gene Name=2-ODD)

[Back to BioLiP]