Structure of PDB 8cbs Chain C

Receptor sequence
>8cbsC (length=52) Species: 11676 (Human immunodeficiency virus 1) [Search protein sequence]
NFRVYYRDSRDPVWKGPAKLLEKGEGAVVIQDNSDIKVVPRRKAKIIRDY
GK
3D structure
PDB8cbs Biological and Structural Analyses of New Potent Allosteric Inhibitors of HIV-1 Integrase.
ChainC
Resolution1.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.7.7.-
2.7.7.49: RNA-directed DNA polymerase.
2.7.7.7: DNA-directed DNA polymerase.
3.1.-.-
3.1.13.2: exoribonuclease H.
3.1.26.13: retroviral ribonuclease H.
3.4.23.16: HIV-1 retropepsin.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 U5L C Y226 W235 K266 I268 Y5 W14 K45 I47
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
Biological Process
GO:0015074 DNA integration

View graph for
Molecular Function
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Biological Process
External links
PDB RCSB:8cbs, PDBe:8cbs, PDBj:8cbs
PDBsum8cbs
PubMed37310224
UniProtP12497|POL_HV1N5 Gag-Pol polyprotein (Gene Name=gag-pol)

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